7 Replies Latest reply on Feb 11, 2016 3:25 PM by a_Monteiro

    Scipy on Edison Install error

    a_Monteiro

      hello,

       

      I try to install scipy on the Edison however the following errors are showing (I have numpy installed), can someone please help ?

      root@edison:~/py_Packages/scipy-0.15.1# python setup.py install

      /usr/lib/python2.7/distutils/dist.py:267: UserWarning: Unknown distribution option: 'install_requires'

        warnings.warn(msg)

      /usr/lib/python2.7/distutils/dist.py:267: UserWarning: Unknown distribution option: 'setup_requires'

        warnings.warn(msg)

      /usr/lib/python2.7/distutils/dist.py:267: UserWarning: Unknown distribution option: 'test_suite'

        warnings.warn(msg)

      lapack_opt_info:

      openblas_lapack_info:

        libraries openblas not found in ['/usr/lib', '/usr/lib/']

        NOT AVAILABLE

       

      lapack_mkl_info:

      mkl_info:

        libraries mkl,vml,guide not found in ['/usr/lib', '/usr/lib/']

        NOT AVAILABLE

       

        NOT AVAILABLE

       

      atlas_3_10_threads_info:

      Setting PTATLAS=ATLAS

        libraries tatlas,tatlas not found in /usr/lib

        libraries lapack_atlas not found in /usr/lib

        libraries tatlas,tatlas not found in /usr/lib/

        libraries lapack_atlas not found in /usr/lib/

      numpy.distutils.system_info.atlas_3_10_threads_info

        NOT AVAILABLE

       

      atlas_3_10_info:

        libraries satlas,satlas not found in /usr/lib

        libraries lapack_atlas not found in /usr/lib

        libraries satlas,satlas not found in /usr/lib/

        libraries lapack_atlas not found in /usr/lib/

      numpy.distutils.system_info.atlas_3_10_info

        NOT AVAILABLE

       

      atlas_threads_info:

      Setting PTATLAS=ATLAS

        libraries ptf77blas,ptcblas,atlas not found in /usr/lib

        libraries lapack_atlas not found in /usr/lib

        libraries ptf77blas,ptcblas,atlas not found in /usr/lib/

        libraries lapack_atlas not found in /usr/lib/

      numpy.distutils.system_info.atlas_threads_info

        NOT AVAILABLE

       

      atlas_info:

        libraries f77blas,cblas,atlas not found in /usr/lib

        libraries lapack_atlas not found in /usr/lib

        libraries f77blas,cblas,atlas not found in /usr/lib/

        libraries lapack_atlas not found in /usr/lib/

      numpy.distutils.system_info.atlas_info

        NOT AVAILABLE

       

      /usr/lib/python2.7/site-packages/numpy/distutils/system_info.py:1505: UserWarning:

          Atlas (http://math-atlas.sourceforge.net/) libraries not found.

          Directories to search for the libraries can be specified in the

          numpy/distutils/site.cfg file (section [atlas]) or by setting

          the ATLAS environment variable.

        warnings.warn(AtlasNotFoundError.__doc__)

      lapack_info:

        libraries lapack not found in ['/usr/lib', '/usr/lib/']

        NOT AVAILABLE

       

      /usr/lib/python2.7/site-packages/numpy/distutils/system_info.py:1516: UserWarning:

          Lapack (http://www.netlib.org/lapack/) libraries not found.

          Directories to search for the libraries can be specified in the

          numpy/distutils/site.cfg file (section [lapack]) or by setting

          the LAPACK environment variable.

        warnings.warn(LapackNotFoundError.__doc__)

      lapack_src_info:

        NOT AVAILABLE

       

      /usr/lib/python2.7/site-packages/numpy/distutils/system_info.py:1519: UserWarning:

          Lapack (http://www.netlib.org/lapack/) sources not found.

          Directories to search for the sources can be specified in the

          numpy/distutils/site.cfg file (section [lapack_src]) or by setting

          the LAPACK_SRC environment variable.

        warnings.warn(LapackSrcNotFoundError.__doc__)

        NOT AVAILABLE

       

      Running from scipy source directory.

      Traceback (most recent call last):

        File "setup.py", line 249, in <module>

          setup_package()

        File "setup.py", line 246, in setup_package

          setup(**metadata)

        File "/usr/lib/python2.7/site-packages/numpy/distutils/core.py", line 135, in setup

          config = configuration()

        File "setup.py", line 173, in configuration

          config.add_subpackage('scipy')

        File "/usr/lib/python2.7/site-packages/numpy/distutils/misc_util.py", line 966, in add_subpackage

          caller_level = 2)

        File "/usr/lib/python2.7/site-packages/numpy/distutils/misc_util.py", line 935, in get_subpackage

          caller_level = caller_level + 1)

        File "/usr/lib/python2.7/site-packages/numpy/distutils/misc_util.py", line 872, in _get_configuration_from_setup_py

          config = setup_module.configuration(*args)

        File "scipy/setup.py", line 16, in configuration

          config.add_subpackage('linalg')

        File "/usr/lib/python2.7/site-packages/numpy/distutils/misc_util.py", line 966, in add_subpackage

          caller_level = 2)

        File "/usr/lib/python2.7/site-packages/numpy/distutils/misc_util.py", line 935, in get_subpackage

          caller_level = caller_level + 1)

        File "/usr/lib/python2.7/site-packages/numpy/distutils/misc_util.py", line 872, in _get_configuration_from_setup_py

          config = setup_module.configuration(*args)

        File "scipy/linalg/setup.py", line 18, in configuration

          raise NotFoundError('no lapack/blas resources found')

      numpy.distutils.system_info.NotFoundError: no lapack/blas resources found