I am sorry to hear you are having problems but let me help you with that.
There is some more information I would like to know from your system configuration, so can you please let me know what the board model you have is? To what SATA port is it connected to?
Also can you please explained if you have a raid configuration in your system?
Motherboard: MSI H87M-G43 (flashed to the latest BIOS E7823IMS v.1.5 and I've run Restore Defaults)
Chipset: Intel H87 Express Chipset
CPU: Intel Core i5-4440 3.1GHz
RAM: Corsair DDR3 4GB XMS3 PC3-10600 x 2 (8GB in total)
SSD: Samsung 840 EVO 120GB
DVD: Liteon IHAS124-14 24X
PSU: Corsair CX430
DIMM2: Corsair XMS3 DDR3 4GB CMX4GX3M1A1333C9
DIMM4: Corsair XMS3 DDR3 4GB CMX4GX3M1A1333C9
SATA Port 1: SSD Samsung 840 EVO 120GB
SATA Port 2:
SATA Port 3:
SATA Port 4:
SATA Port 5: DVD Liteon IHAS124-14 24X
SATA Port 6:
BIOS SATA mode is set to RAID mode.
I intend on connecting 2 x Samsung 1TB SATA II HDD to SATA Ports 3+4 and configuring them as RAID 1 (mirror). Currently these drives are not connected.
This is weird. Most of the times when doing fresh installation while having a SSD as bootable device, it should be visible under device manager as AHCI or RAID depending on the chipset mode. The SCSI should appear when using the SSD to accelerate the RAID or when the SSD is part of the RAID.
If possible, I recommend you reinstalling the Operating System but do not include the F6 drivers during the installation since these drivers come along with the Operating System.