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I would suggest you to first do a frame reset.
Navigate to the Airframe menu and select “Reset” to reset the drone’s airframe configuration. Select “Apply and Restart” and restart the drone
In case the issue still persists, we will need to gather some info for further investigation if that's ok.
Can you please provide the output of this command:
aero-get-version.pyAre you using pixhawk or ardupilot
Can you please provide a video of your drone flying?
I've done a frame reset and recalibrated everything. Looks like a problem with firmware. I've changed to arduino firmware and mission planner and calibrated the drone again. Drone flies like a charm. There are a lot of problems with QGC not uploading mission, not calibrating etc depending on the version of firmware we have. So I'm changing to mission planner for now.